Simulating electronic properties and spectral signals requires robust computational approaches that need tuning with the system’s peculiarities. In this paper, we test implicit and fully atomistic solvation models for the calculation of UV-vis and electronic circular dichroism (ECD) spectra of two pharmaceutically relevant molecules, namely, (2S)-captopril and (S)-naproxen, dissolved in aqueous solution. Room temperature molecular dynamics simulations reveal that these two drugs establish strong contacts with the surrounding solvent molecules via hydrogen bonds. Such specific interactions, which play a major role in the spectral response and are neglected in implicit approaches, are further characterized and quantified with natural bond orbital methods. Our calculations show that simulated spectra, and especially ECD, are in good agreement with experiments solely when conformational and configurational dynamics, mutual polarization, and solute-solvent repulsion effects are considered.
Close-Up Look at Electronic Spectroscopic Signatures of Common Pharmaceuticals in Solution
Gómez, Sara;Ambrosetti, Matteo;Giovannini, Tommaso;Cappelli, Chiara
2024
Abstract
Simulating electronic properties and spectral signals requires robust computational approaches that need tuning with the system’s peculiarities. In this paper, we test implicit and fully atomistic solvation models for the calculation of UV-vis and electronic circular dichroism (ECD) spectra of two pharmaceutically relevant molecules, namely, (2S)-captopril and (S)-naproxen, dissolved in aqueous solution. Room temperature molecular dynamics simulations reveal that these two drugs establish strong contacts with the surrounding solvent molecules via hydrogen bonds. Such specific interactions, which play a major role in the spectral response and are neglected in implicit approaches, are further characterized and quantified with natural bond orbital methods. Our calculations show that simulated spectra, and especially ECD, are in good agreement with experiments solely when conformational and configurational dynamics, mutual polarization, and solute-solvent repulsion effects are considered.File | Dimensione | Formato | |
---|---|---|---|
nap_cap_ecd_uvvis_jpcb.pdf
embargo fino al 27/02/2025
Tipologia:
Accepted version (post-print)
Licenza:
Solo Lettura
Dimensione
14.94 MB
Formato
Adobe PDF
|
14.94 MB | Adobe PDF | Richiedi una copia |
gómez-et-al-2024-close-up-look-at-electronic-spectroscopic-signatures-of-common-pharmaceuticals-in-solution.pdf
Accesso chiuso
Tipologia:
Published version
Licenza:
Non pubblico
Dimensione
5.55 MB
Formato
Adobe PDF
|
5.55 MB | Adobe PDF | Richiedi una copia |
I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.